Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028860.1 Length=52392 Score E Sequences producing significant alignments: (Bits) Value seq2986 96.9 1e-15 seq59741 87.8 6e-13 >seq2986 Length=6960 Score = 96.9 bits (106), Expect = 1e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115 || ||||||||||||||| ||||| ||||| |||||| |||| ||||||||||||| || Sbjct 64 GGCCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTC 123 Query 4116 CCTCCTGGCCTGC 4128 ||||||||||||| Sbjct 124 CCTCCTGGCCTGC 136 >seq59741 Length=555 Score = 87.8 bits (96), Expect = 6e-13 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 4061 GTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTCCCTCC 4120 |||||||||||||||||||| |||| |||||| ||| |||| |||||||||||||||| Sbjct 183 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGTGGGTTCGAGTCCCTCC 242 Query 4121 TGGCCTGC 4128 || ||||| Sbjct 243 TGCCCTGC 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167273574404400