Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq38543 93.3 1e-14 seq40652 84.2 6e-12 >seq38543 Length=803 Score = 93.3 bits (102), Expect = 1e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 31249 GTTTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCT 31308 || ||||||||| |||| ||||||||||| |||||||| || ||| | || ||||||| Sbjct 552 GTGTTTGGCTGCCCCGGATGGATTCGAACCACCGAATGCCTGAGTCAGAGTCAGGTGCCT 493 Query 31309 TACCGCTTGGCGACGGCGCAA 31329 |||||||||||||||| |||| Sbjct 492 TACCGCTTGGCGACGGGGCAA 472 Score = 93.3 bits (102), Expect = 1e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 31249 GTTTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCT 31308 || ||||||||| |||| ||||||||||| |||||||| || ||| | || ||||||| Sbjct 587 GTGTTTGGCTGCCCCGGATGGATTCGAACCACCGAATGCCTGAGTCAGAGTCAGGTGCCT 646 Query 31309 TACCGCTTGGCGACGGCGCAA 31329 |||||||||||||||| |||| Sbjct 647 TACCGCTTGGCGACGGGGCAA 667 >seq40652 Length=1396 Score = 84.2 bits (92), Expect = 6e-12 Identities = 63/73 (86%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 31253 TTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTT--A 31310 ||||||| | |||||||||||||||||||||||||| | ||||||| | |||||||| Sbjct 732 TTGGCTGGGGCGGTAGGATTCGAACCTACGAATGCCAGGATCAAAACCTGGTGCCTTGGG 791 Query 31311 CCGCTTGGCGACG 31323 || |||||||||| Sbjct 792 CCTCTTGGCGACG 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137984563888200