Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq40411 89.7 4e-13 >seq40411 Length=1793 Score = 89.7 bits (98), Expect = 4e-13 Identities = 266/408 (65%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 51267 CTGCATTTCTGCCTGTTTTCCCGCGTTGAATGGTCTGGCATCCGGGTTTCCTAAGTAACC 51326 ||||| ||| ||||||||||| || || || | || ||||| | || | || || Sbjct 918 CTGCACTTCCTGTTGTTTTCCCGCATTAAACGGGCGCGCGTCCGGACTGCCCAGATAGCC 859 Query 51327 ACAAACCCTGCGAGTGACAGAGCAGCTTTCTTTGTCGTTATTACCACACTTAGGGCACTT 51386 |||||||| || ||||| || | | | |||| ||| || || || ||||| | Sbjct 858 ACAAACCCGCCGTGTGACCGAAACCCGTGCAGGATCGTGATTGCCGCAGTTCGGGCAGGT 799 Query 51387 GAAACCTTCCGAGGTGCATAGGAACTCTCCTTTATACCCGCACTTAAAGCACTCGTCTAT 51446 || || ||| || ||| || || || | || || | | || ||||| || Sbjct 798 AAATCCGCGGCTGGTACAGGTGAATTCCCCGTTGAAGCCACAGTCGTAACATTCGTCAAT 739 Query 51447 TGGGGTGTTAGTACCATAATACGGTACTTGATAGTACGCGTAATTCCACACATCTTCCAA 51506 ||| ||||| || || || || || || | | ||| ||||| ||| || ||||||| Sbjct 738 TGGCGTGTTGGTGCCGTAGTAAGGCACGCGGTCGTAGCTGTAATCCCAGACGTCTTCCAG 679 Query 51507 TGCTTCTATGTTATTAATCATAGAAGGGAATTCCCCGTAACATATGTGGCCGCCCGCTGA 51566 || | | ||| | || | || |||| |||||||| || ||||| || Sbjct 678 CGCCTTAAGGTTGTGCTGCACATTGGGATATTCGCCGTAACAGATAAAACCGCCATTGGA 619 Query 51567 GTAGGGTACGA-ACTGCGCTTCAAAATCGATCTTCTCGTAAGGTGTTACTTTCTTGGCTA 51625 | || | || | | |||||||||||||| || |||||||| | || ||||| | | Sbjct 618 G-AGTGGCGGATAGGGAGCTTCAAAATCGATTTTTTCGTAAGGATTCACCTTCTTCTCAA 560 Query 51626 CGTCTAGGTGGAATGAGTTGGTCAGGTATCCTTTATCTGTGACACCTT 51673 |||| || ||||| |||||| || ||||| || || || |||| Sbjct 559 CGTCCAGATGGAAGCTGTTGGTGTAATAACCTTTGTCGGTCACGCCTT 512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 370926819711700