Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028920.1 Length=52530 Score E Sequences producing significant alignments: (Bits) Value seq77134 122 3e-23 >seq77134 Length=829 Score = 122 bits (134), Expect = 3e-23 Identities = 171/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 41556 CCGTTGATCCAGGCGATGGAGTCACGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTC 41615 |||| | ||||||||| ||| || |||||||| || |||||||||||| |||| | Sbjct 691 CCGTAAACCCAGGCGATCATGTCGCGGATCTCGAACCCGGCGTCCTCGATGCGGACGGCC 632 Query 41616 AGCCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACC 41675 | |||||| |||||||| ||| | || || |||||||| || || |||||||| || Sbjct 631 ATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGCAGGTGGCCGCCAGGCTTGAGCACG 572 Query 41676 CGCAGGCATTGCTCCCACATCTCGACGTCGAAGGCGATGCCCGAGCCGTCCCACTTCTTG 41735 |||||||| | |||| |||||| || ||| | | | | |||||| | | Sbjct 571 CGCAGGCACTCAGCCCAAATCTCG--GTGCTTGGC-ACGTC---GTAGTCCCAGCGCCTA 518 Query 41736 CCCATGAATCCCAGTTCGTAGGGCGGGTCTGTGAGAATTGCATCGACGCTGTTGTCT 41792 |||||||| |||| |||| ||||| || |||| |||| |||||| ||||||| Sbjct 517 CCCATGAACGCCAGGCCGTATGGCGGATCGGTGACGATTGAATCGACCGAGTTGTCT 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167714491111200