Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028928.1 Length=53455 Score E Sequences producing significant alignments: (Bits) Value seq77134 132 2e-26 >seq77134 Length=829 Score = 132 bits (146), Expect = 2e-26 Identities = 181/252 (72%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 41241 TTGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCAGGCGATCGAGTCGCGGATCTCGAAA 41300 ||| | ||||| || | ||| ||||| | |||||||||| ||||||||||||||| Sbjct 715 TTGTGGGACTTAGGCATCCCAGACCCGTAAACCCAGGCGATCATGTCGCGGATCTCGAAC 656 Query 41301 CCGGCGTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGCGAACCGCCGAACGCCAAC 41360 ||||||||||||||| |||| || |||||| |||||| | ||| | ||||||| | Sbjct 655 CCGGCGTCCTCGATGCGGACGGCCATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGC 596 Query 41361 ATGTGCCCACCCGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACATCGAAAGCG 41420 | ||| || || |||||||| || |||||||| | |||| |||||| || Sbjct 595 AGGTGGCCGCCAGGCTTGAGCACGCGCAGGCACTCAGCCCAAATCTCG-------GTGCT 543 Query 41421 ATGCCCG-AGCCGTCCCACTTCTTGCCCATGAATCCCAGCTCGTAGGGCGGGTCTGTGAG 41479 || || | |||||| | | |||||||| |||| |||| ||||| || |||| Sbjct 542 TGGCACGTCGTAGTCCCAGCGCCTACCCATGAACGCCAGGCCGTATGGCGGATCGGTGAC 483 Query 41480 AATTGCATCGAC 41491 |||| |||||| Sbjct 482 GATTGAATCGAC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170669911066200