Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028935.1 Length=88698 Score E Sequences producing significant alignments: (Bits) Value seq66202 123 1e-23 >seq66202 Length=972 Score = 123 bits (136), Expect = 1e-23 Identities = 196/274 (72%), Gaps = 9/274 (3%) Strand=Plus/Plus Query 18025 ATCTTTGGTGGAACTGTAAACGCTAAAGGCTACAAAGTTCTTGATGAGCACATTGGCTTA 18084 ||||||||||| || ||| ||||||| ||||| ||||||||| ||| |||| || Sbjct 656 ATCTTTGGTGGTGAAGTTAACTCTAAAGGTTACAAGGTTCTTGATACACACGTTGGTGTA 715 Query 18085 ATCTACGGTGATTCTATCACTCTGGAACGTGCTGAAGAGATTCTTAGTCGTCTTGCTGAA 18144 ||||| |||||||| ||||||||| |||| || || | |||| | |||| ||| Sbjct 716 ATCTATGGTGATTCAATCACTCTGAAACGCGCCACTGA-AATCTTTGAACGCTTG--GAA 772 Query 18145 ---AAGGGCTTTGCAAGTTCTAACGTTGTTTTTGGTGTTGGTTCATACACTTACCAGTAC 18201 || || |||||| ||| |||| || ||| ||||| || |||||| | ||| Sbjct 773 GCTAAAGGTTTTGCATCAAGTAATATTGTATTCGGTATTGGTAGCTATACTTACAACTAC 832 Query 18202 CTGACTCGTGATACCTTTGCATTCGC-TGTCAAAGCAACTCTTGCACAGATAGATGGGGA 18260 || ||||| ||||||| || || ||| ||||||||| | || || ||||| || Sbjct 833 AATACACGTGACACCTTTGGTTTTGCATGT-AAAGCAACTGGTTCAATCATTGATGGTGA 891 Query 18261 AGAAATCATGCTGGCAAAAGACCCTAAAACTGAT 18294 ||| ||| || || ||||| || ||||||||| Sbjct 892 AGAGATCCTGGTGAGTAAAGAGCC-AAAACTGAT 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 283258261559700