Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028939.1 Length=68871 Score E Sequences producing significant alignments: (Bits) Value seq54636 107 8e-19 seq54635 84.2 1e-11 >seq54636 Length=518 Score = 107 bits (118), Expect = 8e-19 Identities = 193/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 36885 CATTGCGGCCTACCTCGCCAACATCGGAGTCGAATCCGGTGGACTGGTGAGTCTGGTGGA 36944 ||| || |||||| ||||| | ||| ||| ||||| ||| | |||||||| Sbjct 431 CATGGCTGCCTACATCGCCCAGTGCGGTCACGAGTCCGGCAAGCTGACCCGCCTGGTGGA 372 Query 36945 GAATCTCAACTACAGCGCCCAAGGACTGGCAAACACTTGGCCGCGCCGGTACGCAGTGGA 37004 || ||||||||||||||||| || ||||| || || ||||| |||| ||||| ||||| Sbjct 371 AAACCTCAACTACAGCGCCCAGGGCCTGGCCAAAACCTGGCCCAGCCGCTACGCCGTGGA 312 Query 37005 CCCTCGCGTCCGTCCGTATGTACCGAACGCTCTGGCGAACCGCCTAGCTCGCAATCCGGT 37064 || || | ||| | ||||||| |||| | | || || ||| |||| Sbjct 311 TCCGCGTGCCCGGGAGCTGAGGCCGAACGAGTTGGCCGCCAGGCTCGCGCGCCGGCCGGA 252 Query 37065 CGCCATCGCCAACAACGTGTACGCTGACCGCATGGGTAATGGCTGCGAGCAGGACGGGGA 37124 || ||||||||||||| || || |||||| || |||||| || ||| || Sbjct 251 AGCGATCGCCAACAACGCCTATGCCAACCGCAACGGGAATGGCCCGGAATCTTCCGGCGA 192 Query 37125 CGGCTGGAAGTATCGCGGTCGCGGCCTGATCCAGCTGACCGG 37166 ||||||||||| || || | || ||| | ||| | ||||| Sbjct 191 TGGCTGGAAGTACCGGGGCAGGGGACTGCTGCAGGTCACCGG 150 >seq54635 Length=814 Score = 84.2 bits (92), Expect = 1e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36892 GCCTACCTCGCCAACATCGGAGTCGAATCCGGTGGACTGGTGAGTCTGGTGGAGAATCTC 36951 |||| ||||| | | ||| ||| ||||| | |||| | ||||| ||||| || Sbjct 246 GCCTTCCTCGGCCAGTGCGGCCACGAGTCCGGCGAACTGACCCGCCTGGTCGAGAACCTG 187 Query 36952 AACTACAGCGCCCAAGGACTGGCAAACACTTGGCCGCGCCGGTACGCAGTGGACCCTCGC 37011 |||||||||||||| || ||||| |||| |||||| |||||||||| | ||||| ||| Sbjct 186 AACTACAGCGCCCAGGGCCTGGCCAACAACTGGCCGAGCCGGTACGCCATCGACCCGCGC 127 Query 37012 G 37012 | Sbjct 126 G 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 219912616425600