Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028952.1 Length=60934 Score E Sequences producing significant alignments: (Bits) Value seq101324 95.1 5e-15 >seq101324 Length=276 Score = 95.1 bits (104), Expect = 5e-15 Identities = 180/265 (68%), Gaps = 20/265 (8%) Strand=Plus/Minus Query 58737 TCAGCCAGGTTCGGGGATGGGATCCCGCGCTTGCTCATGTCCTTTTTACTTTCTACCTTG 58796 ||||||| ||| || || || || |||||||| |||| ||||| || || || ||||| Sbjct 265 TCAGCCATGTTTGGTGACGGTATGCCGCGCTTCTTCATATCCTTCTTGCTCTCAACCTTC 206 Query 58797 ACCTTGCCGGTGTCGCCGTAGTCCACGCGAGGGCGGGACAGCTCGGCCTTGAGCTTGTCC 58856 ||||| ||| || || | || ||||| | ||||| || |||||||||||||| | || Sbjct 205 ACCTTACCGTTGCCGTCATAATCCACCCACGGGCGTGATAGCTCGGCCTTGAGGTATTCA 146 Query 58857 AGGTGCGGCAGGTCACTCGACAGGCTTATCAGCTCGCCAGGATCGTACTCG----GCA-- 58910 || | | | || ||||| ||||| ||| |||||| ||| ||| ||| Sbjct 145 AGCTTCTTGATTGAGGATGAGAGGCTAATCAGTTCGTCAGGATTGTATTCGAGGTGCAGT 86 Query 58911 ----AGCCCATTGACG-GC---------GCGGTAGGTCTTGTAGAACCGGTCCCGCAGCG 58956 | | || ||| || || | ||||||||||||||||| || | Sbjct 85 TCGGATCTGCTTTACGCGCTTCAATGCAACGCCATGTCTTGTAGAACCGGTCACGTACGT 26 Query 58957 CCCACCAGGCCTGCGCCTTGATGTT 58981 |||||||||||| |||||||| || Sbjct 25 GCCACCAGGCCTGAGCCTTGATATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194565679545600