Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq77134 104 8e-18 >seq77134 Length=829 Score = 104 bits (114), Expect = 8e-18 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 42316 GGCTGAGTGCTTGCGTGTGTTGAAACCGGGCGGTCACATGTTGGCGTTCGGCGGCTCGCG 42375 |||||||||| |||| ||| | || || ||||| ||| || ||||||| | |||| | || Sbjct 557 GGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGCCGGCACCCG 616 Query 42376 CACCTGGCACCGGCTGGCGGTGGCGATCGAGGATGCCGGGTTCGAGGTCCGTGACTCCAT 42435 |||| |||||| |||| || |||||||| |||||||||||| |||| ||| || Sbjct 617 CACCCAGCACCGCATGGCCGTCCGCATCGAGGACGCCGGGTTCGAGATCCGCGACATGAT 676 Query 42436 CGCGTGGCTGTACGG 42450 ||| ||| | ||||| Sbjct 677 CGCCTGGGTTTACGG 691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175906595721600