Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028971.1 Length=66111 Score E Sequences producing significant alignments: (Bits) Value seq54636 104 1e-17 seq54635 102 3e-17 >seq54636 Length=518 Score = 104 bits (114), Expect = 1e-17 Identities = 192/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 39722 CCGGTCAGCTGGATCAAGCCGCGCCCGCGATACTTCCAACCATCGCCATCCTGCTCGCAT 39781 ||||| | ||| | || || | || || |||||||| |||||||| || Sbjct 150 CCGGTGACCTGCAGCAGTCCCCTGCCCCGGTACTTCCAGCCATCGCCGGAAGATTCCGGG 209 Query 39782 CCATTACCCATGCGATCCGCGTACACGTTGTTGGCGATGGCGACCGGGTTACGGGCCAGG 39841 ||||| || |||| | || || ||||||||||||| || |||| || || || Sbjct 210 CCATTCCCGTTGCGGTTGGCATAGGCGTTGTTGGCGATCGCTTCCGGCCGGCGCGCGAGC 269 Query 39842 CGGTTCGCCAGAGCGTTCGGGACATACGGGCGGACTCGCGGGTCTACTGCGTACCGGCGA 39901 | | |||| ||||||| | ||| | ||||| || || ||||| |||| Sbjct 270 CTGGCGGCCAACTCGTTCGGCCTCAGCTCCCGGGCACGCGGATCCACGGCGTAGCGGCTG 329 Query 39902 GGCCAGGTGTTGGCCAACCCTTGGGCGCTGTAGTTGAGATTCTCCACCAGACTTACCAGT 39961 |||||||| ||||||| || ||||||||||||||||| || |||||||| | ||| Sbjct 330 GGCCAGGTTTTGGCCAGGCCCTGGGCGCTGTAGTTGAGGTTTTCCACCAGGCGGGTCAGC 389 Query 39962 CCGCCGGACTCGACGCCGATGTTGGCGAGGTAGGCCGCGATG 40003 |||||||||| ||| | ||||| |||||| || ||| Sbjct 390 TTGCCGGACTCGTGACCGCACTGGGCGATGTAGGCAGCCATG 431 >seq54635 Length=814 Score = 102 bits (112), Expect = 3e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 39878 CGCGGGTCTACTGCGTACCGGCGAGGCCAGGTGTTGGCCAACCCTTGGGCGCTGTAGTTG 39937 |||||||| | |||||||||| |||||| ||||||||| || |||||||||||||| Sbjct 128 CGCGGGTCGATGGCGTACCGGCTCGGCCAGTTGTTGGCCAGGCCCTGGGCGCTGTAGTTC 187 Query 39938 AGATTCTCCACCAGACTTACCAGTCCGCCGGACTCGACGCCGATGTTGGCGAGGTAGGCC 39997 || ||||| ||||| | |||| ||||||||||| |||| | | ||||| |||| Sbjct 188 AGGTTCTCGACCAGGCGGGTCAGTTCGCCGGACTCGTGGCCGCACTGGCCGAGGAAGGCA 247 Query 39998 GCGATG 40003 | |||| Sbjct 248 GAGATG 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211094641917600