Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq89998 107 8e-19 seq83684 89.7 2e-13 >seq89998 Length=593 Score = 107 bits (118), Expect = 8e-19 Identities = 113/147 (77%), Gaps = 9/147 (6%) Strand=Plus/Minus Query 32113 GAGGAGTTCGACTATGGCTATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAAC 32172 || || |||||||| |||||||||||||||||||| ||| ||||||| || |||||| || Sbjct 566 GACGACTTCGACTACGGCTATGCGCTCACCGTCCATAAGGCGCAGGGGTCGCAGTGGGAC 507 Query 32173 AACGTCCTGCTGTTTGACGAGTGGTACGGG----AAGGA---CCGGAAGGAATGGTTGTA 32225 ||||| |||||| |||||| | | ||| ||||| || || ||| | || Sbjct 506 CACGTCAGGCTGTTCGACGAGAGCT--GGGCCTCAAGGATTCGCGCGAGCGCTGGCTCTA 449 Query 32226 CACCGCCATTACCCGGGCCGCGGAACG 32252 ||||||||| ||||| ||||| ||||| Sbjct 448 CACCGCCATCACCCGCGCCGCAGAACG 422 >seq83684 Length=502 Score = 89.7 bits (98), Expect = 2e-13 Identities = 175/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 31496 AGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAGCAGATGGGGGAGGACT 31555 |||| ||||| || | | ||||| | || ||| | || |||||| | || ||||| Sbjct 321 AGGCAGCGCTCATCATCATCGATGAATGCTCGATGGTGGATGAGCAGCTCGGCAAGGACC 262 Query 31556 TGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGG-CGATCCGGGGCAGCTCCCGCCCGT- 31613 || | ||||| || || | || | ||||| |||||| || ||||| ||||| || Sbjct 261 TGATGAGCTTTGGCACGCCTGTTCTGGTGCTGGGGCGATCCCGGACAGCTTCCGCCGGTA 202 Query 31614 --GGGCGGCACCCCCTTCTTCAAGAACAAGCCCGACATCCTGCTCACGGAGATTCACCGC 31671 |||||| |||| | || | |||| ||| | || || |||| || || || Sbjct 201 TCGGGCGGTGGTTACTTCACCGAGCAGGAGCCAGACTTTCTTCTGTCGGAAATCCATCGT 142 Query 31672 CAGGCCCAGGACAACCCGATCATCTGGATGTCCAAGGAGGTCCGCGAGGGCCGCGTGCTC 31731 ||||| ||||||||||||| ||| | | ||| ||| || || ||||| |||| | || Sbjct 141 CAGGCGAAGGACAACCCGATTATCCAGCTTGCCATGGATGTGCGAGAGGGACGCGAGATC 82 Query 31732 CGCCCCGGCGACTACGG 31748 | ||||||||||| Sbjct 81 ATGCGTGGCGACTACGG 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198549905149800