Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_029023.1 Length=87712 Score E Sequences producing significant alignments: (Bits) Value seq66202 109 3e-19 >seq66202 Length=972 Score = 109 bits (120), Expect = 3e-19 Identities = 189/271 (70%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 13469 ATCTGTTTTAGGGTCTTTTGCAAGCATAATCTCTTTGCCACCAATACTTGCAAGAGTTGC 13528 ||| ||||| || ||||| | || ||||||| ||| |||| ||| | |||||| Sbjct 924 ATCAGTTTT-GGCTCTTTACTCACCAGGATCTCTTCACCATCAATGATTGAACCAGTTGC 866 Query 13529 TTTGACA-GCAAATGCAAAGGTGTCACGAGTCATATACTGGTAAGTGTAAGAGCCTACAC 13587 ||| ||| ||||| ||||||||||||| || | || | |||||| || || | || Sbjct 865 TTT-ACATGCAAAACCAAAGGTGTCACGTGTATTGTAGTTGTAAGTATAGCTACCAATAC 807 Query 13588 CAAATACTACGTTAGAGCTTGCAAAACCCATTTCATACAAACGCTTCAGGATTTCGTTTG 13647 | ||||| | ||| ||||||||| | | | ||| || | | |||||| | | Sbjct 806 CGAATACAATATTACTTGATGCAAAACCTTTAGCTTCCAAGCGTTCAAAGATTTCAGTGG 747 Query 13648 CACGTTCCAACGTGATAGAGTCACCATAGATAAGTCCAATGTGCTCATCCAGTACCTTAA 13707 | |||| || ||||| || ||||||||||| | |||| ||| ||| || ||||| Sbjct 746 CGCGTTTCAGAGTGATTGAATCACCATAGATTACACCAACGTGTGTATCAAGAACCTTGT 687 Query 13708 AACCTTTAGAGTTGATAGTCCCTCCAAAGAT 13738 ||||||||||||| | || |||||||| Sbjct 686 AACCTTTAGAGTTAACTTCACCACCAAAGAT 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 280108072115900