Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_029059.1 Length=51492 Score E Sequences producing significant alignments: (Bits) Value seq77134 140 1e-28 >seq77134 Length=829 Score = 140 bits (154), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 40533 CCGTACAGCCACGCGATCGAGTCGCGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTC 40592 ||||| | ||| |||||| |||||| |||||||| || |||||||||||| |||| | Sbjct 691 CCGTAAACCCAGGCGATCATGTCGCGGATCTCGAACCCGGCGTCCTCGATGCGGACGGCC 632 Query 40593 AGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACC 40652 | |||||| |||||||| |||| | || || |||||||| || || |||||||| || Sbjct 631 ATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGCAGGTGGCCGCCAGGCTTGAGCACG 572 Query 40653 CGCAGGCATTGCTCCCACATCTCGACATCGAAAGCGATGCCCG-AGTTGTCCCACTTCTT 40711 |||||||| | |||| |||||| || || || || |||||| | | Sbjct 571 CGCAGGCACTCAGCCCAAATCTCG-------GTGCTTGGCACGTCGTAGTCCCAGCGCCT 519 Query 40712 ACCCATGAAGGCCAGCTCGTAGGGCGGGTCTGTGAGAATTGCATCGAC 40759 ||||||||| ||||| |||| ||||| || |||| |||| |||||| Sbjct 518 ACCCATGAACGCCAGGCCGTATGGCGGATCGGTGACGATTGAATCGAC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164398030664400