Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_029094.1 Length=131903 Score E Sequences producing significant alignments: (Bits) Value seq44175 104 2e-17 >seq44175 Length=2096 Score = 104 bits (114), Expect = 2e-17 Identities = 218/325 (67%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 96017 AGATAGCACATCATATTCATTATATACTTTCATTTCTGCCCAAGCATCTGGGTTATCTTT 96076 ||| ||||||||| | ||||| |||||||||| ||||||| || | ||| |||| Sbjct 1133 AGAGAGCACATCAAAGATGTTATACTCTTTCATTTCATCCCAAGCTTCAAGATTACCTTT 1192 Query 96077 TAAACATTCAGCCCACAGTTTATACCCTGCAAAAGATTGGTGTGTTAACTTTTTATATTT 96136 | ||| || | ||||| ||| || | ||| |||| || ||| || ||||| Sbjct 1193 CATACACTCTGACCACAAAGTATGACCAGGAAATTTAAGGTGCTTTTTCTTCTTGTATTT 1252 Query 96137 GGTGCATAATTTGTCAGACATATATTCTAACTTGTTACTTGTGAAAGCAAAACTACTCTT 96196 | || | ||| || | ||| || || | || || ||| || |||| | || Sbjct 1253 CTTACAAAGTTTATCTGTCATGTACTCAAGTTTATTTGATGTAAATCCAAACAGAGATTT 1312 Query 96197 AGCCATCTGTAAAGTATCTATATGCTTATAACTAGATGGTGGTGTGTAACCGTTCATTAT 96256 ||| || | || || || || || ||| | || ||| ||| |||| || || || Sbjct 1313 AGCAATAAGCAACGTGTCGATCTGGCGATATGTGGAGGGTTTAGTGAAACCATTAATGAT 1372 Query 96257 AAAACGAGCATTAATCTTTTTAGCATCAAACTTCTTACTGTTTTGACCAATAACCACATC 96316 ||| || ||||| || || || ||||||||| |||||||||||| || | ||| Sbjct 1373 AAATCGTGCATTGATTTTCTTCATATCAAACTTACGGATGTTTTGACCAACCACAAAATC 1432 Query 96317 AGCTTCATCTAGCAGCTTCCATAGA 96341 ||||||||||| || ||||| ||| Sbjct 1433 AGCTTCATCTAAAAGTTTCCACAGA 1457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421294706711200