Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq56393 226 2e-54 seq38326 201 7e-47 seq22478 194 1e-44 seq56368 161 6e-35 seq63933 91.5 9e-14 seq75989 87.8 1e-12 seq14112 87.8 1e-12 >seq56393 Length=430 Score = 226 bits (250), Expect = 2e-54 Identities = 222/281 (79%), Gaps = 4/281 (1%) Strand=Plus/Minus Query 78880 GGAGCTCTACGACAACGA-GTGTGACTACACCGAGCAGCTCTATGACGACGTCGGACTCA 78938 ||||||||| |||||||| | | || |||||||| ||| || || | |||||| || | Sbjct 429 GGAGCTCTATGACAACGAAGCGCGA-TACACCGAAGCGCTTTACGATGGCGTCGGCCTGA 371 Query 78939 CCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCT 78998 ||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||| Sbjct 370 CCGAGGACGTCAAGAAGTTCCTGCACTACAATGCCAACAAGGCGCTGATGAACCTCGGCT 311 Query 78999 ACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAGACCCGGCCATCATGTCCGCGCTCT 79058 |||| |||||||||| | ||| | | | | || | ||||||||| | || ||||| | Sbjct 310 ACGAGGCACTGTTCCGC-CGGAGGCTGCAAGGTCA-ATCCGGCCATCCTTTCGGCGCTGT 253 Query 79059 CACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCG 79118 | || | ||| ||||||||||||||||||||||| ||||| ||| ||| ||||||| Sbjct 252 CGCCCAATGCCGATGAGAACCACGACTTCTTCTCCGGCTCGGGTTCGTCCTATGTCATCG 193 Query 79119 GCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159 |||| || | || | ||| ||||| ||||| |||||| Sbjct 192 GCAAGGCGGTGAGTACCGAAGACGAGGATTGGGATTTCTGA 152 >seq38326 Length=251 Score = 201 bits (222), Expect = 7e-47 Identities = 195/251 (78%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 78265 GTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACAT 78324 |||| |||| || ||||||||||||||| |||| || ||| | ||| ||||||||||||| Sbjct 1 GTGGAATCGCCTGACCGGCAACTTCTGGCTGCCGGAAAAGATCCCGCTGTCCAACGACAT 60 Query 78325 CCCATCCTGGGACACCCTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGG 78384 ||| ||||||| ||||| ||||| | || || | || || || || || |||||||| Sbjct 61 CCCCTCCTGGGCGACCCTGACGCCCAAGGAACAGCAGCTGACCATCCGCGTCTTCACCGG 120 Query 78385 CCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGC 78444 ||| |||||||| |||||||||||| | | || |||||| |||| | ||||| || Sbjct 121 CCTGACCCTGCTGGACACCATCCAGAACGCCGTGGGCGCCCCGACGCTACTGGCCGATGC 180 Query 78445 CAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGC 78504 | ||| || |||||||| |||||| || ||||||||| ||||||||| |||| || || Sbjct 181 CGTCACGCCCCACGAGGAAGCGGTGATCGCCAACATCGGCTTCATGGAGGCGGTGCATGC 240 Query 78505 CAAGTCCTACA 78515 ||||||| Sbjct 241 GCGCTCCTACA 251 >seq22478 Length=2302 Score = 194 bits (214), Expect = 1e-44 Identities = 372/540 (69%), Gaps = 24/540 (4%) Strand=Plus/Plus Query 78623 TACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTC 78682 ||||||| ||||| || || ||| || | ||||| | |||||| || || Sbjct 5 TACCGCGCTGACGATCCGTTAAAGAAAAAAATCGCCAGCGTCTTTCTGGAGTCGTTTCTG 64 Query 78683 TTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACC 78742 || || |||||||||| ||||||||||||||||| ||||||| ||||||||| || || Sbjct 65 TTTTATTCGGGCTTCTGGCTGCCGATGTACTGGTCCAGCCGCGGCAAGCTGACCAATACG 124 Query 78743 GCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATAC 78802 ||||| |||| || || || ||||| || || || || || || ||||| ||||| || Sbjct 125 GCGGATCTGATTCGTTTAATCATCCGCGATGAGGCGGTACACGGCTACTATATCGGCTAT 184 Query 78803 AAGTACCAGCGAGGCCTCGAGACCCAG--------GGGCCGGCGCGGCAGGCTGAGCTCA 78854 || |||||| || || ||| ||| |||||| ||| | || || | Sbjct 185 AAATACCAGAAAGCGCTTGAG---CAGGTCGATGAGGGCCGCCGC-GAAGCCT----TAC 236 Query 78855 AGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACG-AGTGTGACTACACCGAG 78913 || ||| | | |||||||||| || ||| || || || | |||| | ||| || || Sbjct 237 AGCAGTTCGCCATCGATCTGCTGCTGGCGCTGTATGAAAATGAAGTG-GCCTATACAGAA 295 Query 78914 CAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGC 78973 ||| || | ||| || | || || || || | ||||||| ||||||| | Sbjct 296 GCGCTGTACGGCGAAACAGGCTGGGCAGACGAGGTGAAAACCTTCCTGCATTACAACGCC 355 Query 78974 AACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC-CATGGC 79032 || || ||| ||||||| || |||||||| || |||||||| ||| ||| || | | Sbjct 356 AATAAAGCGTTGATGAATCTGGGCTACGAGGCTCTGTTCCCGGCGGAGCTGACGCAGGTC 415 Query 79033 AGACCCGGCCATCATGTCCGCGCTCTCACC--AGGCGGCGACGAGAACCACGACTTCTTC 79090 | | |||||||| || | || || ||||| | ||| || |||||||| || |||||| Sbjct 416 A-ATCCGGCCATTCTGGCGGCACTGTCACCCAATGCG--GATGAGAACCATGATTTCTTC 472 Query 79091 TCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGG 79150 || || || || ||| ||||| || || ||||| | | || | ||| || |||||| Sbjct 473 TCGGGCTCAGGATCGTCTTACGTGATGGGGAAAGCGGTCGAAACCGAAGACGAAGACTGG 532 >seq56368 Length=283 Score = 161 bits (178), Expect = 6e-35 Identities = 185/243 (76%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 78849 AGCTCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGAGTGTGACTACA 78908 || ||||||| | | | | ||| ||||| ||| ||||| ||||||||| | ||||| Sbjct 44 AGGTCAAGGACTTCGCCTACGAGCTGCTGCAGGACCTCTATGACAACGAGGTGGCCTACA 103 Query 78909 CCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGA--AGTTCCTGCGCTA 78966 ||||| | ||||| ||| ||| || | |||||| || |||| | ||||| | ||| Sbjct 104 CCGAG-ACCTCTACGACAGCGTGGGCTGGAGCGAGGACGTGAAGAGAAATTCCTTCACTA 162 Query 78967 CAACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCA--AGGAAGAG 79024 ||||| ||||||||||||||||||||| |||| |||||| |||||||||| || | || Sbjct 163 CAACGCCAACAAGGCGCTGATGAACCTGGGCTTCGAAGCCCTGTTCCCCAGCAGCATGA- 221 Query 79025 ACCATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGAC 79084 | | | ||| |||||| ||| | |||| || || || ||| |||||||||||||||| Sbjct 222 CCGACGTCAG-CCCGGCGATCCTCGCCGCCCTGTCGCCCAGCGCCGACGAGAACCACGAC 280 Query 79085 TTC 79087 ||| Sbjct 281 TTC 283 >seq63933 Length=285 Score = 91.5 bits (100), Expect = 9e-14 Identities = 189/276 (68%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 78362 CTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGC 78421 ||||| || || || || |||||||| || ||||| |||||||| ||| | ||| Sbjct 12 CTCACCATTCGCGTCTTTACCGGCCTGACACTGCTGGACACCATTCAGAATGTGCTGGGC 71 Query 78422 GCCATCTCGCTCATCGCC-GACGCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACAT 78480 || | | | | | ||| ||||| || ||||| |||||||||||||| | || || Sbjct 72 GC-ACCGGGGTTAATGCCTGACGCGCTGACGCCGCATGAGGAGGCGGTGCTGTCGAATAT 130 Query 78481 CGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTC 78540 | || |||||| |||| || ||| |||||||||||||| || || || |||| | Sbjct 131 CAGCTTTATGGAGGCGGTGCATGCCCGCTCCTACAGCTCGATTTTTTCGACCTTATG-TA 189 Query 78541 CTCCAAGC-AGATTGACGAGGCGTTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCA 78599 | | ||| | | || | ||||| || ||| || |||||| || |||||| | Sbjct 190 ATACCAGCGATGTGGATGCGGCGTACCAGTGGAGCGAAGAGAACCAGGCCCTGCAAAATA 249 Query 78600 AGGCCCAGATCGTCCTGGACTACTACCGCGGCGACG 78635 | ||| ||| ||||| | | ||||||| |||| Sbjct 250 AAGCCGGGATTATCCTGACCCATTACCGCGCTGACG 285 >seq75989 Length=485 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 45289 CGACGCTGCCGTTCATCCATCCGCACGTGGCGCTGATGCCGGATGCTCACAGCGGCAAGG 45348 ||| | ||||||||||| |||| ||||| ||||||| || | || ||||||| Sbjct 267 CGAAGATGCCGTTCATCTTCAAGCACCTGGCGGTGATGCCCGACGTGCATCTGGGCAAGG 208 Query 45349 GGTCCGCGGTCGGCACTGTGATCCCGACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCG 45408 | || | |||||| |||||||| | || | ||| | ||||| || || || |||| Sbjct 207 GCTCGACCATCGGCAGCGTGATCCCCTCGGTGGGCGCGATCATCCCTGCTGCCGT-GGCG 149 Query 45409 TCGACATCGGCTGCGGCATGATCGGCGTGC 45438 | |||||||||||||| ||||||| || || Sbjct 148 TGGACATCGGCTGCGGGATGATCGCCGCGC 119 >seq14112 Length=1225 Score = 87.8 bits (96), Expect = 1e-12 Identities = 80/100 (80%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 79060 ACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCGG 79119 ||||| || |||||| |||||||||||||||||||| ||||| ||| ||| |||||||| Sbjct 992 ACCAG-CGCCGACGAAAACCACGACTTCTTCTCCGGCTCGGGTTCGTCCTATGTCATCGG 934 Query 79120 CAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTTCTGA 79159 ||| || | || | |||||||| ||||| |||||| Sbjct 933 CAAGGCAGTCAGTACCGAGGATGAGGATTGGGATTTCTGA 894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298846267945400