Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq34305 154 2e-32 seq34483 120 3e-22 seq31229 120 3e-22 seq33108 118 1e-21 seq45636 91.5 2e-13 >seq34305 Length=2218 Score = 154 bits (170), Expect = 2e-32 Identities = 136/170 (80%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 52720 GTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCGAACA 52779 ||||| ||||| | ||| || || |||| || |||||||| || |||||||||||||| Sbjct 599 GTAAAGGTACGGGTAATCACGTCCTGCTGCTGCTCTTTGGTGAGCGAGTTAAAGCGAACG 658 Query 52780 GCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGCTTCA 52839 ||||| || ||||| ||||| || ||||| || ||||| ||||| ||||| || || Sbjct 659 GCATAGCCCGAAACGCGGATGGTTAACTGAGGATATTTCTCAGGGTTATCCATTGCGTCC 718 Query 52840 AGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTC 52889 | ||||||||| || ||||| |||||||| ||||| ||||| |||||||| Sbjct 719 ATCAACATTTCCCGGTTCATCACGTTAACATTCAGATGCTGGCCGCCTTC 768 >seq34483 Length=1392 Score = 120 bits (132), Expect = 3e-22 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 66399 AAAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCT 66458 ||| |||| | |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1315 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 1256 Query 66459 ATCCAGCTGAGCTAAG 66474 |||||||||||||||| Sbjct 1255 ATCCAGCTGAGCTAAG 1240 >seq31229 Length=3871 Score = 120 bits (132), Expect = 3e-22 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 66399 AAAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCT 66458 ||| |||| | |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 48 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 107 Query 66459 ATCCAGCTGAGCTAAG 66474 |||||||||||||||| Sbjct 108 ATCCAGCTGAGCTAAG 123 >seq33108 Length=3479 Score = 118 bits (130), Expect = 1e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 52716 TTCAGTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCG 52775 ||| ||||| ||||| | ||| || |||||||||||||| ||||| || |||||||| Sbjct 2959 TTCCGTAAAGGTACGGGCAATGACGTCACGCTGTTGTTCAGGCGTCAGCGAATTAAAGCG 2900 Query 52776 AACAGCATAACCAGAAACACGGATAGTCAACTGTGGGTATTTTGTAGGGTCTTCCATCGC 52835 || ||||| || |||||||| || |||| ||| || || || ||| | || || || Sbjct 2899 CACGGCATACCCGGAAACACGAATGGTCAGCTGCGGATACTTCTCAGGATGTTTCACGGC 2840 Query 52836 TTCAAGCAACATTTCACGATTCATTACGTTAACGTTCAGGTGCTGACCGCCTTCGACACG 52895 || || | ||||||| || ||||||||||| | |||||| |||||||| || || Sbjct 2839 GTCTTCCAGCGTTTCACGGCGCAGGACGTTAACGTTTAAGTGCTGCCCGCCTTCCACGCG 2780 >seq45636 Length=1761 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 66410 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAGCTGAG 66469 |||| ||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||| Sbjct 44 CCCTGCAGGACTCGAACCTGCGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAGTTGAG 103 Query 66470 CTAAG 66474 ||||| Sbjct 104 CTAAG 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521264804868000