Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031021.1 Length=41224 Score E Sequences producing significant alignments: (Bits) Value seq70435 127 5e-25 seq40427 80.6 7e-11 >seq70435 Length=537 Score = 127 bits (140), Expect = 5e-25 Identities = 147/193 (76%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 31003 ATGCCGAATTCTTTCAGACGTTCGAATTCAAAGGTGCTCGCATCCGCGACGGCCTCAATC 31062 ||||||||||| ||||| || ||||| || |||| ||||| | |||||||| ||| Sbjct 280 ATGCCGAATTCCTTCAGGCGCTCGAACTCGCCGGTGGCAGCATCGGACACGGCCTCGATC 339 Query 31063 ATCTGGTTAAGGTCTTTACCCATAGCCGATGCGGTGTTGCCATAGGAG--CGGAGCGCTT 31120 ||||| || |||||||| ||||| || | ||||||||||| |||||| | |||| ||| Sbjct 340 ATCTGATTGAGGTCTTTCCCCAT-GCTGCGGCGGTGTTGCCGTAGGAGGTCAGAGC-CTT 397 Query 31121 CTTCTGATGGGGTGAGGCCTAGAGCTACCAGTTTACGGAACCCTTCTACCGCCTGTTCAA 31180 | || ||||| || ||||| || ||||| || | ||| ||||| || ||||| || | Sbjct 398 C-TCGGATGGCGTCAGGCCGAGGTTCACCAGCTTGCTGAAGCCTTCAACGGCCTGCTCCA 456 Query 31181 GGCCGTAAGGTGT 31193 ||| ||| || || Sbjct 457 GGCTGTACGGCGT 469 >seq40427 Length=976 Score = 80.6 bits (88), Expect = 7e-11 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 39832 ACGTTGTCGTTGTACAGGCCGAGTGCAGTTGCAATAAGGCGACGCTGCGCCTGACGCTGC 39891 |||||||| |||||||| || | | | || || ||| ||||||||| ||| ||||||| Sbjct 337 ACGTTGTCATTGTACAGACCAACTACTGTCGCGATAGCGCGACGCTGAGCCACACGCTGC 396 Query 39892 CAG-AAGTTATCCAGACGGGATGCGACGGACTGCAACGGATTCTGGCTGGTAA-GTTCTA 39949 ||| || || || || ||| ||| || ||| || ||||| ||| |||| | ||||| Sbjct 397 CAGTAACTTGTC-AGGCGGCTTGCAACAAACTCCAGCGGATCCTGATTGGTGATGTTCTT 455 Query 39950 CAGTCAGGTCTGCCTGGCCGAAACCTTCGTTCAGATATGCAACGCGGGCC 39999 || ||||| | | | ||||||||||| ||||| |||||||| Sbjct 456 CAC-CAGGTTCATCGCGTTCCAGCCTTCGTTCAGGTATGCGGCGCGGGCC 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131591271639600