Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031062.1 Length=75147 Score E Sequences producing significant alignments: (Bits) Value seq31376 87.8 9e-13 >seq31376 Length=18204 Score = 87.8 bits (96), Expect = 9e-13 Identities = 221/336 (66%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 69374 AGCACCCTGTGCAAAACGACACTTGATCAGGATGACCTTCGCATACTGAGAAGCCGATGG 69433 |||||||||| | || | ||| || ||| | || | ||||| | || ||||| Sbjct 6308 AGCACCCTGTTCGAATCTACAACCTATTCTGATAAGTTTTGAATACTTAATGGCTGATGG 6249 Query 69434 CAGAACGGAGTTTTCTTGGGTCACGTTTTTCAGTAACCAGCCGCCCTGTGAAATATCGAA 69493 | || ||||||||| | || || |||||| ||| | ||||| ||||||||||| Sbjct 6248 ATTAGTGGCGTTTTCTTGAATAACTTTATTCAGTGTCCAATCACCCTGAGAAATATCGAA 6189 Query 69494 GCCCTGATTACAGTGGTCAAACCAAACGTCTTCCATAACCGACTGACCAGCACGAATGGC 69553 | | ||| |||||||||||||| | | ||| || | || | |||||| Sbjct 6188 TGGATACTCACAATGGTCAAACCAAACATTATTCATCACAGCTTGGGTGGTACGAATCAG 6129 Query 69554 ACTGAAGGCATATTCGCCAGTGTGTCCTTCGAAGTTGGCATCCGTCAGCTTGATAGCAGT 69613 ||||| |||||||| ||||| | || | ||||| || | | | | || || || Sbjct 6128 ACTGACAGCATATTCACCAGTATTACCGTTAAAGTTAGCGTTAGATATTTCAATTGCTGT 6069 Query 69614 TGGGTGATCCCATGCACCGGGGTTTTCATTCGACCAGTCTGTACGGAAGAATGATCCTCG 69673 | || ||||||||||| || |||| || ||||| | | || |||| || Sbjct 6068 TAAATGGTCCCATGCACCTGGACTTTCGTTTGACCAAGTTCCCCAGATAAATGCAGCTTT 6009 Query 69674 ACCTTGAGAAGAGTAAATCTGATCCAAGGTAGTATC 69709 || || ||| ||||||||||| || ||||||| Sbjct 6008 ACAACGATAAGTATAAATCTGATCAAATTTAGTATC 5973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239963923676400