Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031067.1 Length=52496 Score E Sequences producing significant alignments: (Bits) Value seq77134 118 4e-22 >seq77134 Length=829 Score = 118 bits (130), Expect = 4e-22 Identities = 174/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 41073 GACTTCGGGAACCCGCTGCCGTACAGCCAGGCGATGGAGTCACGAATCTCGAAGCCCGCG 41132 ||||| || | ||| ||||| | ||||||||| ||| || |||||||| || ||| Sbjct 709 GACTTAGGCATCCCAGACCCGTAAACCCAGGCGATCATGTCGCGGATCTCGAACCCGGCG 650 Query 41133 TCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGC 41192 ||||||||| |||| || |||||| |||||||| |||| | || || |||||||| Sbjct 649 TCCTCGATGCGGACGGCCATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGCAGGTGG 590 Query 41193 CCACCGGGCTTGAGGACCCGCAGACATTGCTCCCACATCTCGACATCGAAAGCGATGCCT 41252 || || |||||||| || ||||| || | |||| |||||| | | | | | Sbjct 589 CCGCCAGGCTTGAGCACGCGCAGGCACTCAGCCCAAATCTCG---GTGCTTGGCACGTC- 534 Query 41253 GAGCTGTCCCACTTCTTGCCCATGAAGGCCAACTCGTAGGGCGGGTCTGTGACGATGGAG 41312 | |||||| | | |||||||| |||| |||| ||||| || |||||||| || Sbjct 533 --GTAGTCCCAGCGCCTACCCATGAACGCCAGGCCGTATGGCGGATCGGTGACGATTGAA 476 Query 41313 TCGAC 41317 ||||| Sbjct 475 TCGAC 471 Score = 95.1 bits (104), Expect = 4e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 40802 GCCGTGCTCGAGCACGTTCGCCGCGACGGTGCCCGCCAGGGGCTTCCGGGCGACGACGAT 40861 ||| ||| | ||||||||||||||||||||||| | ||| ||||| ||||||||| ||| Sbjct 829 GCCATGCGCCAGCACGTTCGCCGCGACGGTGCCGGACAGAGGCTTGCGGGCGACGGTGAT 770 Query 40862 CGGCTCGAATGCCGGTTTCAGCGCCGTGCCCCAGC 40896 |||||| | || || || || || |||||||||| Sbjct 769 CGGCTCCAGGGCGGGCTTGAGGGCGGTGCCCCAGC 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167605859458800