Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq75989 84.2 1e-11 seq2902 84.2 1e-11 >seq75989 Length=485 Score = 84.2 bits (92), Expect = 1e-11 Identities = 104/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 46307 TGCCATTCATCTACCCCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTG 46366 |||| ||||||| | ||| | ||| ||||||| || | || |||||||| || Sbjct 261 TGCCGTTCATCTTCAAGCACCTGGCGGTGATGCCCGACGTGCATCTGGGCAAGGGCTCGA 202 Query 46367 CCGTGGGCACGGTGATCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACA 46426 || | |||| ||||||||| | || ||| ||||||| || ||||||| || |||| Sbjct 201 CCATCGGCAGCGTGATCCCCTCGGTGGGCGCGATCATCCCTGCTGCCGTGGC-GTGGACA 143 Query 46427 TCGGTTGCGGGATGATCGGCG 46447 |||| ||||||||||||| || Sbjct 142 TCGGCTGCGGGATGATCGCCG 122 >seq2902 Length=689 Score = 84.2 bits (92), Expect = 1e-11 Identities = 106/142 (75%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 47046 CTGCCACCACAACTACACCGAGAACGTCACGATCAAC-GGCGAGAGGGTGTGGCTGACGC 47104 |||||||||||||||||||| || || | || |||| || |||||||||| | | Sbjct 548 CTGCCACCACAACTACACCGCCCGCGAGACCCACTACGGGCGTGA-GGTGTGGCTGTCCC 606 Query 47105 GCAAGGGTGCGATCGACGCCAGCGAGGGCAAGTACGGACTCATCCCCGGCTCCATGGGCA 47164 |||| || || ||| |||| |||||||| || ||| ||| | || || || |||||| Sbjct 607 GCAA-GGCGCCATCAGCGCCCGCGAGGGCGAGCTCGGCCTCGTGCCGGGGTCGATGGGCG 665 Query 47165 CCAAGTCGTACGTCGTTGTGGG 47186 | ||| |||||||| ||||| Sbjct 666 ACGCGTCCTACGTCGTCGTGGG 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313411900475100