Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq7403 93.3 5e-14 seq6540 91.5 2e-13 seq45636 87.8 2e-12 >seq7403 Length=2901 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 ||||| | ||||||||||||||||||| | ||||||||||||| | ||||||||||||| Sbjct 925 ATTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGA 984 Query 19807 GCCCAGGTGGAGGAGC 19822 | |||||| | ||||| Sbjct 985 GTCCAGGTCGCGGAGC 1000 >seq6540 Length=5298 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 670 TTCCGCGATAGCTCAGTCGGTAGAGCAAATGACTGTTAATCATTGGGTCCCTGGTTCGAG 729 Query 19808 CCCAGGTGGAGGAGC 19822 |||||| | ||||| Sbjct 730 TCCAGGTCGCGGAGC 744 >seq45636 Length=1761 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTG 165844 ||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 106 TAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCCTG 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621057202836000