Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031243.1 Length=42395 Score E Sequences producing significant alignments: (Bits) Value seq77134 118 3e-22 seq27079 86.0 2e-12 >seq77134 Length=829 Score = 118 bits (130), Expect = 3e-22 Identities = 120/154 (78%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 36936 GGCTGAGTGCTTGCGCGTGTTGAAACCGGGCGGTCACCTGCTCGCGTTCGGCGGCTCCCG 36995 |||||||||| |||||||| | || || ||||| |||||||| ||||| | |||| |||| Sbjct 557 GGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGCCGGCACCCG 616 Query 36996 CACCTGGCACCGGCTGGCGG-CGGCGATCGAGGACGCGGGCTTCGAGGTTCGCGACTCGA 37054 |||| |||||| |||| | | || ||||||||||| || |||||| | |||||| || Sbjct 617 CACCCAGCACCGCATGGCCGTCCGC-ATCGAGGACGCCGGGTTCGAGATCCGCGACATGA 675 Query 37055 TCGCGTGGCTGTACGGCAGCGGGTTCCCGAAGTC 37088 |||| ||| | ||||| ||| | || ||||| Sbjct 676 TCGCCTGGGTTTACGGGTCTGGGATGCCTAAGTC 709 >seq27079 Length=4003 Score = 86.0 bits (94), Expect = 2e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 37297 TGGCAGGGCTGGGGCACTGCGCTGAAACCGGCGTTCGAGCCGATCGTGGTCGCGCGTAAA 37356 ||| | |||||||||||||| | ||||| ||| |||||| ||| || || |||||| Sbjct 1148 TGGGAAGGCTGGGGCACTGCCTTAAAACCCGCGCACGAGCCTATCTGCGTTGCCCGTAAA 1207 Query 37357 CCGCTGGCGGGCACCGTGGCTGCGAACGTCCTGGAGCACGGTACGGGGGCGCTGAACATC 37416 ||||||||||| || || || ||||| |||| ||||| || || | | | || || Sbjct 1208 CCGCTGGCGGGTACTGTCGCAAGTAACGTACTGGCACACGGCACAGGCGGGTTAAATATA 1267 Query 37417 GACGCCTGCCGCATCCC 37433 |||| ||||| |||| Sbjct 1268 GACGGATGCCGTGTCCC 1284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135332673550200