Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031245.1 Length=221908 Score E Sequences producing significant alignments: (Bits) Value seq33499 116 5e-21 seq39710 100 4e-16 >seq33499 Length=26748 Score = 116 bits (128), Expect = 5e-21 Identities = 111/137 (81%), Gaps = 5/137 (4%) Strand=Plus/Plus Query 26288 TGAATTGCTGGGACATCCTGAGAGCCAGTCAGACTACAACGTAAGGATGAAATAAGCCTA 26347 ||||||||||||| ||| |||||| || | ||||||||| | ||||| || | Sbjct 14083 TGAATTGCTGGGAAGCCCTTAGAGCCTTTCTG-CTACAACGTGACT-TGAAA--AGG-TG 14137 Query 26348 AGCGTGAATGTTTGAAAACTGACTGGATTGGATAATCAGCATCCAAGCTCCGAATAGGAG 26407 |||||||||| ||||||| ||| ||||||| |||||||| ||||||||||| ||||||| Sbjct 14138 AGCGTGAATGCTTGAAAAGTGAAAGGATTGGGTAATCAGCCTCCAAGCTCCGTATAGGAG 14197 Query 26408 AAGGTCCAACGACTATC 26424 |||| ||||||||||| Sbjct 14198 AAGGATCAACGACTATC 14214 >seq39710 Length=779 Score = 100 bits (110), Expect = 4e-16 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 129966 TGCTGAGTTAATCAAGCATGCATCTAATGCATTCCT-AGCTACTAAAATATCATTTATGA 130024 ||||||| | || || |||| || |||||||| | |||||| || ||||| ||||| | Sbjct 262 TGCTGAGATGATTAAATATGCTTCCAATGCATTTTTTAGCTACAAAGATATCTTTTATTA 203 Query 130025 ATGGTATTGCTAAGCTATGTGAATTCTACGGAGGTAATGTTGACGAGGTAGCTCGTGGGA 130084 ||| |||||||| |||| ||| || | | ||||| || |||||| | || | Sbjct 202 ATGAGATTGCTAATATATGCGAAAAGGTTGGGGCGCAGGTTGAAGAAGTAGCTAGAGGTA 143 Query 130085 TGGGAATGGATAGTCGAATCGGTAATCAATTCTTAAAAGCTGGATTAGGATTCGGAGGTT 130144 |||||||||| | | ||||| |||||| | ||||| || | || | || |||| Sbjct 142 TGGGAATGGACGGCAGGATCGGCCCTCAATTTCTGAAAGCAGGTATCGGCTATGGGGGTT 83 Query 130145 CATGTTTCCCTAAGGAT 130161 | ||||| ||||||||| Sbjct 82 CCTGTTTTCCTAAGGAT 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708821223984000