Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031255.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq2086 84.2 7e-12 >seq2086 Length=9363 Score = 84.2 bits (92), Expect = 7e-12 Identities = 150/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 27449 CTTGGCCTTGAAGAACCCCTGCAG--CGCTCCCGGC-TGGACAGGCCGCATCGCGTAGAC 27505 |||| ||| | |||| | | ||| |||| |||| | || || |||| || ||||| Sbjct 4496 CTTGCCCTGGTAGAAGCGCGACAGGTCGCTGCCGGTATTCACCGGGCGCAAGGCATAGAC 4437 Query 27506 CAGCCCCGATATGACTGTGAACAGCGGCATCCGGATGTCCTCGAGCAGAAGGTACGAG-T 27564 || || ||| | ||||||||||||||||||| | ||||| | ||| ||| | Sbjct 4436 GTAGCCGGAGATGGCGGTGAACAGCGGCATCCGGACATAGACGAGCGAATCGTA-GAGAT 4378 Query 27565 ACCGCCACACGGAGTCATCGGCGACCGTCATCCCTCGGCTGAAATCACTTCCGATGACGT 27624 | ||| ||||||||| |||| ||| |||| || || | | ||| |||||||||| Sbjct 4377 AGCGCAGCACGGAGTCGTCGGGCACCTTCATGCCCAGGGTCGACGAACTGCCGATGACGT 4318 Query 27625 GGCCGGCCACCATGAGGATGATGGCGAGGCCGCG 27658 |||| || ||||| || | | || |||||||| Sbjct 4317 GGCCCGCTACCATCAGAAACAGCGCCAGGCCGCG 4284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149710392250200