Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq31229 87.8 1e-12 seq34483 86.0 4e-12 >seq31229 Length=3871 Score = 87.8 bits (96), Expect = 1e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| ||||||||| ||||||||||| | |||||||||| | |||||| ||||||||| Sbjct 127 CGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAAT 68 Query 7912 CCTGTATGGCGTACCAATTTTAAATCTATTT 7942 |||||| |||| ||| ||| ||||||| Sbjct 67 CCTGTAGGGCGCGCCACTTTCTCTTCTATTT 37 >seq34483 Length=1392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| ||||||||| ||||||||||| | |||||||||| | |||||| ||||||||| Sbjct 1236 CGCCCTTAGCTCAGCTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAAT 1295 Query 7912 CCTGTATGGCGTACCAATTT 7931 |||||| |||| ||| ||| Sbjct 1296 CCTGTAGGGCGCGCCACTTT 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335041497366100