Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq28556 136 3e-27 seq29103 113 3e-20 >seq28556 Length=388 Score = 136 bits (150), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||||||||| ||||||||||| | ||| || | || ||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | ||| | ||||| || ||| Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | ||||| || | || || || || | ||| || |||| Sbjct 194 ATCTTCGACTTGACATTGT--CAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCT 251 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| |||||||||||||| Sbjct 252 TGCCGGTGAGGGTCTTGACGAAGATTTGCAT 282 >seq29103 Length=1863 Score = 113 bits (124), Expect = 3e-20 Identities = 163/224 (73%), Gaps = 7/224 (3%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAA-GCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||||| |||| || | | |||| ||| | |||| ||||||||| |||||||| || Sbjct 1059 ATTCCACCTCGGAGACGAAGAACCAAGTGGACGCGTCGACTCCTTTTGAATGTTGTAGTC 1118 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| |||| || |||||||||| ||||| ||||| |||||||| || | Sbjct 1119 TGCAAGAGTGCGGCCGTCCTCAAGCTGCTTCC-GGCAA-GATCAGGCGCTGCTGGTCCGG 1176 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | || ||||| ||| ||||| ||| || ||| | || ||||||| ||| Sbjct 1177 GGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATCGTGTCGGAGGAC 1234 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 || ||||| | || || ||||| ||||| |||||||||||||| Sbjct 1235 TCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359418723995100