Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq29103 123 2e-23 >seq29103 Length=1863 Score = 123 bits (136), Expect = 2e-23 Identities = 164/222 (74%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCA-GCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 || || || ||||| | |||| || | |||| |||||| |||||||| ||||| | Sbjct 1062 CCACCTCGGAGACGAAGAACCAAGTGGACGCGTCGACTCCTTTTGAATGTTGTAGTCTGC 1121 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || |||||||| ||||| || ||||||||||| ||||||| ||| Sbjct 1122 AAGAGTGCGGCCGTCCTCAAGCTGCTT-CCGGC-AAGATCAGGCGCTGCTGGTCCGGGGG 1179 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || || |||||||||| ||| || ||| || | || | |||||| ||||| Sbjct 1180 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATCGTGTCGGAGGACTCG 1237 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854 ||||| | || || || || |||||||| ||||| |||||| Sbjct 1238 ACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 1279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461551022360000