Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq22 96.9 4e-15 >seq22 Length=1232782 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/177 (73%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 54757 CTTC-ATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 |||| || |||| ||| || || || || ||||| |||||||| || | ||||| | Sbjct 878496 CTTCTATAACTTGACTGAAGAGCTTCTTGGTTTCCTTGTGTAGGTTACTAATTGCTATCC 878555 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCT 54874 | || || || | ||||||||||||||| | ||||| || || ||| || |||| ||| Sbjct 878556 TGGCAGCAAGCACGGCATAATCCGGATGACGGGTAGT-CATGTAGGCGGCGGTTTCCGCT 878614 Query 54875 GTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 54931 | |||| |||||| || ||||| || |||||||| | | ||| | ||| || ||| Sbjct 878615 GCCAGATTGTCCAGCTCGACCGTGGTGACTCCATTGAAAACTCCATTGATGACTTTC 878671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720954327760