Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq22 98.7 1e-15 >seq22 Length=1232782 Score = 98.7 bits (108), Expect = 1e-15 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 66786 TCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATT 66845 || || || |||| ||| || || || || ||||| |||||||| || | ||||| Sbjct 878495 TCTTCTATAACTTGACTGAAGAGCTTCTTGGTTTCCTTGTGTAGGTTACTAATTGCTATC 878554 Query 66846 CTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGC 66904 || || || | | ||||||||||||||| | ||||| || || ||| || |||| || Sbjct 878555 CTGGCAGCAAGCACGGCATAATCCGGATGACGGGTAGT-CATGTAGGCGGCGGTTTCCGC 878613 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTC 66962 ||||||| |||||| || ||||| || |||||||| | | ||| | ||| || ||| Sbjct 878614 TGCCAGATTGTCCAGCTCGACCGTGGTGACTCCATTGAAAACTCCATTGATGACTTTC 878671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172084237080