Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq23 114 1e-20 >seq23 Length=1203155 Score = 114 bits (126), Expect = 1e-20 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 ||||||||| | |||||| || ||||||||||| | ||| || ||| || || || || Sbjct 979037 TCGCAACACAAGGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGCCA-AG-GTACGA 979094 Query 94852 A--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 || |||| || || || ||||||| |||| || ||||| || ||||||||||| Sbjct 979095 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGGGGAATACCTTCC 979154 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | ||| || ||||||||| | | | ||||||| ||||| || | ||| Sbjct 979155 TTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTG 979214 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||||| || ||||| ||| | || | ||||| Sbjct 979215 ATGGTCTTCCCAGTGAGACTGTTGAAAAAGA 979245 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||| || || | ||| ||||| || ||| ||| || Sbjct 977587 ACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATCTTCA 977646 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| |||||| ||||||| | || |||||| || || || |||||||| ||||||| Sbjct 977647 AGCTGCTTTCCGGCAAAGATCAGTCGTTGCTGGTCGGGGGGGATACCTTCCTTGTCATGG 977706 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||||||||||| | ||| ||||| | ||||| || | ||||| ||||| Sbjct 977707 ATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCCAAAGTGATTGTTTTC 977766 Query 94979 CCAGT 94983 || || Sbjct 977767 CCTGT 977771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290712483320