Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq19 87.8 3e-12 >seq19 Length=3986360 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 194048 TCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGA 194107 ||| |||||||| || ||| || ||| | || ||||||||||| || ||||| || || Sbjct 1770127 TCTCTATCTTGGAAACCTTTCGGCAAAGCGAGACTGGGGACACGCCAAAGATTACGTGGA 1770068 Query 194108 AGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 || |||||| ||||| ||||||||| | |||||||| | ||| | || || || || Sbjct 1770067 AGGAATGTGGAAGATGTTACAACAGGATAAGCCCGATGACTTTGTACTCGCGACCGGAGA 1770008 Query 194168 ACAGTATTCTGTTAGAGA 194185 | |||| ||||| || Sbjct 1770007 AACTCATTCAGTTAGGGA 1769990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554321783720