Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq23 100 3e-16 >seq23 Length=1203155 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || || ||| ||||||| | ||| | || || ||||||||| || | || || Sbjct 978067 ACAGGTAAAACGATCACTTTGGAAGTTGAGTCCTCCGACACCATTGACAATGTGAAGGCT 978008 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| || || || || || |||||||| | ||||||| || |||||| Sbjct 978007 AAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAACAGCGTCTCATTTTCGCTGGCAAA 977948 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||||| | | | | || || ||||| ||||| ||||||||| | ||| Sbjct 977947 CAACTTGAAGATGGGCGTACCTTGGCTGATTACAACATCCAAAAGGAATCTACTCTTCAT 977888 Query 26973 CTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || | || ||||||||| Sbjct 977887 CTCGTACTCCGTCTCCGAGGAGGAA 977863 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || || ||| | ||||| | ||| | |||||| ||||||||||| | || || Sbjct 978362 ACCGGCAAAACCATCACTCTAGAAGTTGAATCATCGGACACCATCGACAACGTGAAGGCC 978303 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| || ||||| || || |||||||||||||| | || |||| || || || Sbjct 978302 AAGATTCAGGATAAAGAGGGAATCCCTCCCGATCAACAGCGCCTTATTTTCGCTGGAAAG 978243 Query 26913 CAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||||| ||||| | | | || ||| || || ||||| ||||| || ||||| | || Sbjct 978242 CAACTTGAAGACGGTCG-TACTCTAGCTGATTACAACATCCAAAAGGAGTCTACACTTCA 978184 Query 26972 TCTGGTCCTGAGACTTAGAGGAGG 26995 | |||| || | || ||||||| Sbjct 978183 TTTGGTTCTTCGTCTCCGAGGAGG 978160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661879454640