Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq23 87.8 2e-12 >seq23 Length=1203155 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| || ||||| || || |||||||||||| Sbjct 978326 GACACCATCGACAACGTGAAGGCCAAGATTCAGGATAAAGAGGGAATCCCTCCCGATCAA 978267 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||| | || |||| || || |||||||| ||||| | | || ||| ||||| || Sbjct 978266 CAGCGCCTTATTTTCGCTGGAAAGCAACTTGAAGACGGTCG-TACTCTAGCTGATTACAA 978208 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||| ||||| || |||||| ||||||| || Sbjct 978207 CATCCAAAAGGAGTCTACACTTCATTTGGT 978178 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| ||| |||| || | || || ||| || ||||||||| || | ||||| Sbjct 978653 ACTGGCAAAACGATCACTTTGGAGGTGGAGTCCTCCGACACCATTGACAATGTCAAGGCG 978594 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 || ||| ||||| |||||||| ||||| || || ||| | ||||| | | || ||| Sbjct 978593 AAAATTCAAGACAAGGAAGGCATCCCTCCGGACCAGCAGCGTCTGATCTTTGCTGGTAAG 978534 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| ||||| | | | | | | || || ||||||||||| || || || |||| Sbjct 978533 CAACTTGAAGACGGCCGCACCCTTGCGGACTACAACATTCAAAAGGAGTCCACCCTTCAC 978474 Query 24195 TTAGT 24199 || || Sbjct 978473 TTGGT 978469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935544133485