Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq23 102 7e-17 >seq23 Length=1203155 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||||||||| ||||||||||| || | ||| | |||| Sbjct 978466 AGAACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCCGCAAGGGTGCGGCCGTCT 978525 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| || || ||| | || || ||||| |||||| ||| | ||| || ||||| Sbjct 978526 TCAAGTTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCT 978585 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | ||| || | | | | |||||| || |||| |||| ||||| ||| Sbjct 978586 TGAATTTTCGCCTTGACATTGTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGATCGTT 978645 Query 16904 TTTCCGGTCAG--CGTTTTGACAAAAAT 16929 || || ||||| |||| || || ||| Sbjct 978646 TTGCCAGTCAGTCTGTTTCGAAAACAAT 978673 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/137 (76%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 ||||| ||||| || | || |||| ||| || |||||||||||||| || |||||||| Sbjct 978740 TACCC-CCTCGCAGACGGAGGACCAAATGAAGGGTGGACTCCTTTTGGATATTGTAGTCA 978798 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 || | ||| |||| ||||| |||||||| || | || | |||||||||||| | Sbjct 978799 GCAAGCGTTCGACCGTCTTCCAACTGTTTGCCTGCGAAGATCAATCGCTGTTGGTCCGGA 978858 Query 16826 GGCACGCCCTCTTTGTC 16842 || | ||||||||||| Sbjct 978859 GGGATACCCTCTTTGTC 978875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087570480130