Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq23 111 1e-19 >seq23 Length=1203155 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 25020 TTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG 25079 ||||| || ||| | ||||| | || || || || || ||||| ||||| | ||| Sbjct 977774 TTGACAGGGAAAACAATCACTTTGGAGGTCGAATCTTCCGACACGATCGACAACGTCAAG 977715 Query 25080 CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGC 25139 ||| ||| |||||| ||||| || || || ||||| || || | || |||||||| Sbjct 977714 GCAAAGATCCATGACAAGGAAGGTATCCCCCCCGACCAGCAACGACTGATCTTTGCCGGA 977655 Query 25140 AAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTA 25199 || || | ||||||| |||||| ||| |||||||| ||||| ||||||||||| || Sbjct 977654 AAGCAGCTTGAAGATGGTCGCACCTTGGCGGATTACAACATTCAGAAAGAATCCACTCTT 977595 Query 25200 CATTTAGTGCT 25210 || || || || Sbjct 977594 CACTTGGTTCT 977584 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 25020 TTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG 25079 ||||| || || |||| || | || || ||||| |||||||| ||||| |||| Sbjct 978947 TTGACTGGCAAGACCATTACTCTAGAGGTCGAGTCTTCTGACACGATCGACAACGTGAAA 978888 Query 25080 CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGC 25139 |||||| |||||||| || || || || ||||||||||| | || || || ||| Sbjct 978887 GCCAAAATCCAAGACAAAGAGGGTATCCCTCCGGACCAACAGCGATTGATCTTCGCAGGC 978828 Query 25140 AAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTA 25199 ||||| || ||||| | ||| || | | || |||||||| ||||| || ||||| || Sbjct 978827 AAACAGTTGGAAGACGGTCGAACGCTTGCTGACTACAATATCCAAAAGGAGTCCACCCTT 978768 Query 25200 CATTTAGTGCT 25210 ||||| || || Sbjct 978767 CATTTGGTCCT 978757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327540536905