Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq30 84.2 4e-11 >seq30 Length=3970159 Score = 84.2 bits (92), Expect = 4e-11 Identities = 102/137 (74%), Gaps = 9/137 (7%) Strand=Plus/Plus Query 42336 TGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTG--- 42389 ||||| ||||||||||||||||| ||||||||| | || |||||| ||| Sbjct 3700305 TGGACTGCCGAGGAGATTGACCTCTCCAAGGACATGCACGACTGGGACAACAAACTAAAC 3700364 Query 42390 TCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGC 42449 ||||| ||| || ||| ||||| || | || ||||||||||||||||| || || Sbjct 3700365 TCTGA---CGAGAAACACTTCATCAAACACGTCCTTGCCTTCTTCGCCGCCTCGGATGGG 3700421 Query 42450 ATAGTCAATGAGAACCT 42466 || ||||| |||||||| Sbjct 3700422 ATCGTCAACGAGAACCT 3700438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338173031120