Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 9e-16 >seq23 Length=1203155 Score = 98.7 bits (108), Expect = 9e-16 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| ||||| |||||||| || | | ||| ||| || || Sbjct 978760 ACCAAATGAAGGGTGGACTCCTTTTGGATATTGTAGTCAGCAAGCGTTCGACCGTCTTCC 978819 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||| || ||| ||||||||||||| || || ||||| || ||||| ||||| | Sbjct 978820 AACTGTTTGCCTGCGAAGATCAATCGCTGTTGGTCCGGAGGGATACCCTCTTTGTCTTGG 978879 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||||| || | |||| |||| ||||| | | |||||| || | || | || || Sbjct 978880 ATTTTGGCTTTCACGTTG-TCGATCGTGTCAGAAGACTCGACCTCTAGAGTAATGGTCTT 978938 Query 127084 GCCGGTCA 127091 ||| |||| Sbjct 978939 GCCAGTCA 978946 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | |||||||| ||||| || |||||||| | | || ||| || || Sbjct 978178 ACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAATCAGCTAGAGTACGACCGTCTTCA 978237 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || ||||||||| | || | ||||| ||||||||||| || ||||| || ||| Sbjct 978238 AGTTGCTTTCCAGCGAAAATAAGGCGCTGTTGATCGGGAGGGATTCCCTCTTTATCCTGA 978297 Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||| | |||| |||| |||||||| || ||||| | || | ||||| Sbjct 978298 ATCTTGGCCTTCACGTTG-TCGATGGTGTCCGATGATTCAACTTCTAGAGTGATGGTTTT 978356 Query 127084 GCCGGTCAG 127092 |||||| || Sbjct 978357 GCCGGTAAG 978365 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||| | || | || || || ||||| || ||||| ||| || Sbjct 979026 CCACCACGAAGTCGCAACACAAGGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGCC 979085 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || | || || ||||| ||||||||||||| ||||| || || Sbjct 979086 AAGGTACGACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCGCTGTTGATCCGGGGGA 979145 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||||| |||| || | |||||| | |||||| Sbjct 979146 ATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTG-TCAATGGTGTCAGATGACTCGAC 979204 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 ||| | ||| | || || || || ||| | || | ||| Sbjct 979205 TTCCAGGGTGATGGTCTTCCCAGTGAGACTGTTGAAAAA 979243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500282892880