Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq23 102 9e-17 >seq23 Length=1203155 Score = 102 bits (112), Expect = 9e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | |||| ||| | |||| |||||||||||| ||||| || | Sbjct 978158 TGCCTCCTCGGAGACGAAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAATCAG 978217 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 |||||| || |||| || || ||||| || ||||| || | |||||| || |||| | Sbjct 978218 CTAGAGTACGACCGTCTTCAAGTTGCTTTCCAGCGAAAATAAGGCGCTGTTGATCGGGAG 978277 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543 | | | ||| || ||| ||||| ||| | ||| | | | ||||| ||||| Sbjct 978278 GGATTCCCTCTTTATCCTGAATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGATGATTCA 978336 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGC 46573 || || | |||||||||||||| || ||| Sbjct 978337 ACTTCTAGAGTGATGGTTTTGCCGGTAAGC 978366 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| | || ||||| |||| || || ||||| || || || Sbjct 978486 CTCCTTTTGAATGTTGTAGTCCGCAAGGGTGCGGCCGTCTTCAAGTTGCTTACCAGCAAA 978545 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || |||||||| || ||| ||||| | Sbjct 978546 GATCAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGAATTTTCGCCTTGACATT 978605 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | |||||| || ||||| |||| ||||| |||||||| ||||| Sbjct 978606 GTCAATGGTGTCGGAGGACTCCACCTCCAAAGTGATCGTTTTGCCAGTCAG 978656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237785303240