Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq25 93.3 3e-13 >seq25 Length=1007441 Score = 93.3 bits (102), Expect = 3e-13 Identities = 189/281 (67%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 |||||||| ||||| || ||||||||||| | | || | || | ||||||| | || Sbjct 563381 ACAAGACGGTTATCGAAGTCTTCACCTCCGAGGTGGGTGTCACCAGCCGTAGCTTTGACC 563322 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || ||||| | | ||| || | ||||| || ||||| || | || Sbjct 563321 TCGAAGATACCCTCTTCGATGGTCAAGAGGGAGACATCGAAAGTACCACCTCCAAGGTCG 563262 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| | || || || | | || || || | |||||| |||| |||||| Sbjct 563261 AAAATCAAGACGTTTCGCTCGCCGACGGTCTTCTTGTCCAAACCATAAGCAATAGCAGCT 563202 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || ||||| || ||||| || | | ||| || | || ||||| || ||||| ||| Sbjct 563201 GCGGTTGGCTCGTTAATGATCCGAAGAACGTTCAACCCGGCAATCAGACCAGCATCCTTA 563142 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 || || |||| || || ||||| || || || || ||||| Sbjct 563141 GTTGCCTGTCGCTGGGAGTCGTTGAAGTAGGCGGGGACAGT 563101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780818082773422