Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq22 95.1 1e-14 >seq22 Length=1232782 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 48204 ACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGT 48263 |||| || ||| |||| ||| ||||||||||| || ||| || |||| || || | Sbjct 877578 ACTCGAGACATGAATAGATCAGGTATCCAAAGCGCATAAAACAAGTCCCGAGCTCGACTT 877637 Query 48264 TCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGT 48323 ||||| ||||| |||| | | || || | |||| | | ||| ||||||||||| Sbjct 877638 TCTTCCTTGCCGTGATTCTTCCTCAGGTCTAACCAGTCAAAAACATCCGCATGCCATGGC 877697 Query 48324 TCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATC 48378 || | || ||||| | |||| |||| ||| |||||||||||||| | ||||| Sbjct 877698 TCAAGGTAGATTGCAAAGGCACCAGGTCTTTTGTTACCTCCTTGATCGACATATC 877752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108188706680