Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq23 102 7e-16 >seq23 Length=1203155 Score = 102 bits (112), Expect = 7e-16 Identities = 106/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || || | |||||| ||| || ||||| || ||||||||||||||||| Sbjct 978168 GAGACGAAGAACCAAATGAAGTGTAGACTCCTTTTGG--ATGTTGTAATCAGCTAGAGTA 978225 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||||| ||||| || |||||||| | || ||||| ||||| ||||| Sbjct 978226 CGACCGTCTTCAAGTTGCTTTCCAGCGAAAATAAGGCGCTGTTGATCGGGAGGGATTCCC 978285 Query 563374 TCTTTATCTTGAATTTT 563390 |||||||| ||||| || Sbjct 978286 TCTTTATCCTGAATCTT 978302 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||||||||| |||||||| ||| ||| ||||| || ||||||||||| | || Sbjct 977873 GAGACGGAGTACGAGATGAAGAGTAGATTCCTTTTGG--ATGTTGTAATCAGCCAAGGTA 977930 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||||||||| || || ||||| || | || ||||| || || || || Sbjct 977931 CGCCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCCGGGGGGATACCC 977990 Query 563374 TCTTTATCTTGAATTTT 563390 || || |||||||| || Sbjct 977991 TCCTTGTCTTGAATCTT 978007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029291399047630