Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq22 114 2e-20 >seq22 Length=1232782 Score = 114 bits (126), Expect = 2e-20 Identities = 323/491 (66%), Gaps = 14/491 (3%) Strand=Plus/Plus Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169 |||||||||||||||||| || || | ||| |||| || |||| || | || || | Sbjct 876754 CTTCACGTTCCACATGTCGAATTGGAGGATACCTTGACTGGCGGG--TGAGCCGGGAA-A 876810 Query 213170 GG---AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 || || || || | || |||||| || || |||| || | ||| | || Sbjct 876811 GGTCTCATAAGGACCCTCCTTGATGGCCAATTCATTTGAGGCCTCCAATGAAGCATGATA 876870 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 | ||||| || || || |||||||||||||||| |||| || ||| || | | Sbjct 876871 AAGCGTTTCGAAAATTTCAGTGTTGAGCTTCTTGGCAGCTGGTGATTCGAATGGTAGTTT 876930 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | |||||| |||| || || || || |||||||| || || || | |||||||| Sbjct 876931 TAGAATTTGGAAGGCATCGGCTAGTCCTTGAACCCCGATACCAATCGGACGGTGTCTCAT 876990 Query 213347 GTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406 ||| ||||| ||| || ||||| | ||| |||||||||| | || || || Sbjct 876991 GTTCGACTTTTTCGCCTCAGGCACCGGGTAGTAATTGATGTCGATGATCCTATTCAGATT 877050 Query 213407 GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACA-CGTAGCCCCCGT 213465 |||| || | |||||||| | || | | || ||||| | ||| || | Sbjct 877051 ATAGGTGACCTCCTTGGTGACTT----CATGAA---GTTTTTGAAAATTGTATTTACCAT 877103 Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525 | | ||| || |||||||| ||| | || ||||| ||||| || | | | Sbjct 877104 CAACAATAAAAGTGGGTAGGGCGATCGAGGCTAAATTACAAACAGCCACTTCGTCGGGGG 877163 Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585 | | ||| || || ||||| ||||| |||||| | || |||||| || ||||||| | Sbjct 877164 CAGAGTATTCAATAATCTCCGTGCAAAGGTTGGAGGATTTGATGGTTCCGAGGTTCTTTT 877223 Query 213586 GGTTTGACTTT 213596 |||| || ||| Sbjct 877224 GGTTGGATTTT 877234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531786958080