Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq30 86.0 1e-11 >seq30 Length=3970159 Score = 86.0 bits (94), Expect = 1e-11 Identities = 141/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Plus Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAA 25572 ||||| ||||| |||||||| || ||||||||||| ||| |||| || | | | ||| Sbjct 3700305 TGGACTGCCGAGGAGATTGACCTCTCCAAGGACATGCACGACTGGGAC-AACAAACTAAA 3700363 Query 25573 ----GACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTAT 25628 |||||| | || || |||| |||| | || ||||| || ||||| ||||| || Sbjct 3700364 CTCTGACGAGAAACACTTCATCAAACACGTCCTTGCCTTCTTCGCCGCCTCGGATGGGAT 3700423 Query 25629 AGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGT 25687 || |||||||| || |||| |||||| | || || | |||| | || || | Sbjct 3700424 CGTCAACGAGAACCTCATCGAGCGATTCAGTGGCGAGGTCCAAGTA-GCCGAAGCACGCT 3700482 Query 25688 GTTTCTACGGTTTCCAGAT 25706 |||||||||| || || || Sbjct 3700483 GTTTCTACGGATTTCAAAT 3700501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843789881280