Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq22 96.9 2e-15 >seq22 Length=1232782 Score = 96.9 bits (106), Expect = 2e-15 Identities = 133/185 (72%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| |||| ||| || ||||| | |||||||| || || | |||| ||||||| || Sbjct 877586 CATGAATAGATCAGGTATCCAAAGCGCATAAAACAAGTCCCGAGCTCGACTTTCTTCCTT 877645 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||||| | || ||||| | ||||||| ||| | |||||||| || | || Sbjct 877646 GCCGTGATTCTTCCTCAGGTCTAACCAGTCAAAAACATCCGCATGCCATGGCTCAAGGTA 877705 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGT-TTCAT 26111 ||| ||||| ||| |||||| || |||||||| || |||| || || | || Sbjct 877706 GATTGCAAAGGCACCAGGTCTTTTGTTACCTCCTTGATCGACATATCGCGCCGTCTATAT 877765 Query 26112 TGAAA 26116 ||||| Sbjct 877766 TGAAA 877770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039731698525