Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 2e-15 >seq23 Length=1203155 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | ||||| |||| ||| | ||||| ||| || || || Sbjct 978150 AATTTGCATGCCTCCTCGGAGACGAAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTT 978209 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || || | | || || | ||| ||||| || ||||| | | |||||| Sbjct 978210 GTAATCAGCTAGAGTACGACCGTCTTCAAGTTGCTTTCCAGCGAAAATAAGGCGCTGTTG 978269 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||| |||||||| || || |||| || | || || || || || Sbjct 978270 ATCGGGAGGGATTCCCTCTTTATCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGA 978329 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGC 193340 || |||||||||||||| || ||||| || || ||| Sbjct 978330 TGATTCAACTTCTAGAGTGATGGTTTTGCCGGTAAGC 978366 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||| | || ||||| ||||| | |||| || || || || Sbjct 977855 AATTTGCATTCCTCCTCGGAGACGGAGTACGAGATGAAGAGTAGATTCCTTTTGGATGTT 977914 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || || | ||| || | |||||| || || ||||| | | |||||| Sbjct 977915 GTAATCAGCCAAGGTACGCCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTG 977974 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || || || || ||||| || || | || | ||| ||| || ||||| Sbjct 977975 ATCCGGGGGGATACCCTCCTTGTCTTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGA 978034 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAG 193339 ||||||||||| | ||| || ||||||||||| || Sbjct 978035 GGACTCAACTTCCAAAGTGATCGTTTTACCTGTGAG 978070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653421625840