Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq34 104 7e-17 >seq34 Length=422895 Score = 104 bits (114), Expect = 7e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 60138 ATTGTGTGAAAATATACCTCTCGGATGCTGCGTCCTTGCCACCCATAAG--ACGGGTTCC 60195 |||| || ||||||||||| | || || ||||| || || || | || ||| || || Sbjct 23217 ATTG-GTAAAAATATACCTTGCCGAGGCCGCGTCTTTACCGCC--TGAGGCACGAGTACC 23273 Query 60196 AAATTGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAG 60255 |||||| || |||||| | | || ||||||||| || || || ||||||||||| Sbjct 23274 AAATTGCCCATTTGGCGAAAGCACGTTGATGTTGTTACTTCCCACAAAGTTTTGAGCGAG 23333 Query 60256 ACCAACAATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAAC 60315 || ||||| | | | || || ||||| ||||| |||||| | |||||||| ||| Sbjct 23334 TCCTACAATTGTCTGAGTCAAGCTTGCTTCGCCGTGGTGATATGCCGAATGTTCGGAACA 23393 Query 60316 ATATCCACTGAATTGTGCGACTTTAATTTC 60345 ||| || | || || || ||||| ||||| Sbjct 23394 ATAACCTCCCAACTGGGCCACTTTGATTTC 23423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815959383319