Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20]
87 sequences; 66,403,143 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq11 95.1 1e-13
seq28 93.3 5e-13
>seq11
Length=2255697
Score = 95.1 bits (104), Expect = 1e-13
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496
||| ||||| | ||||| || | ||||||||||| || |||||||||| | |||| |
Sbjct 1134776 GGCTTCGGTAGCAATGCGCTCAAAGATGTCGTTGACGAAAGAGTTCATGATCAACATGGC 1134717
Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548
||||| ||||| || ||||||||| ||||| ||||| |||||||| |||
Sbjct 1134716 TTTGTTCGAGATACCGGTGTCGGGGTGGACCTGTTTGAGGACCTTGTAAATG 1134665
>seq28
Length=870612
Score = 93.3 bits (102), Expect = 5e-13
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||| |||||||| || || || || ||| ||| ||| | ||||| ||||||
Sbjct 173457 GACAGTATCGGCGGTACAGTAACATGTGTGATCAAGAACTGTCCGACCGGCCTAGGCGAG 173516
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|||||||| ||||| | || ||| || |||||||| || ||||||| || || |||
Sbjct 173517 CCGTGCTTCGACAAACTGGAAGCCAAACTAGCCCACGCAATCATGTCGATTCCCGCGACC 173576
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
|| || ||||| ||||| ||||| ||
Sbjct 173577 AAAGGTTTCGAAATTGGTAGCGGCTT 173602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107132060372579
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |