Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq23 96.9 2e-15 >seq23 Length=1203155 Score = 96.9 bits (106), Expect = 2e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| || ||||||||||| || |||| | | |||| |||| Sbjct 977584 AGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATCT 977643 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||| |||||||||||||||||||| | || | || |||||||| Sbjct 977644 TCAAGCTGCTTTCCGGCAAAGATCAGTCGTTGCTGGTCGGGGGGGATACCTTCCTTGTCA 977703 Query 34886 TTTATTTTTTGTTTGACG 34903 | || ||| |||||| Sbjct 977704 TGGATCTTTGCCTTGACG 977721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692454663853