Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq23 96.9 3e-15 >seq23 Length=1203155 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GC 137242 ||||||||| | ||| | ||| ||||||| |||||| || ||||| ||||||||||| || Sbjct 978159 GCCTCCTCGGAGACGAAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAATCAGC 978218 Query 137243 TCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | | || | |||||| ||||| || ||||| | || || || || |||||||||| Sbjct 978219 T-AGAGTACGACCGTCTTCAAGTTGCTTTCCAGCGAAAATAAGGCGCTGTTGATCGGGAG 978277 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | || || ||||| || ||| || || | | || | ||||| | | ||| | Sbjct 978278 GGATTCCCTCTTTATCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGATTCAA 978337 Query 137363 CTTCAACAGTCACCGTCTTGCCGGT 137387 |||| | ||| | || |||||||| Sbjct 978338 CTTCTAGAGTGATGGTTTTGCCGGT 978362 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | ||| || |||| || |||||||| || ||||||||||| | Sbjct 977569 CCTCCACGGAGACGGAGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCCGCC 977628 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||||| || || || || ||| ||||||| |||||||| ||||| || Sbjct 977629 AAGGTGCGACCATCTTCAAGCTGCTTTCCGGCAAAGATCAGTCGTTGCTGGTCGGGGGGG 977688 Query 137305 ATGCCTTCTTTGTC 137318 || ||||| ||||| Sbjct 977689 ATACCTTCCTTGTC 977702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 |||||||| | ||| | || | ||||| |||||||| ||||| ||||||||||| | Sbjct 977865 CCTCCTCGGAGACGGAGTACGAGATGAAGAGTAGATTCCTTTTGGATGTTGTAATCAGCC 977924 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | | ||||| |||||||| ||||| | || ||||| || ||||| || || Sbjct 977925 AAGGTACGCCCATCTTCAAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGATCCGGGGGG 977984 Query 137305 ATGCCTTCTTTGTC 137318 || || || ||||| Sbjct 977985 ATACCCTCCTTGTC 977998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543468708400