Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20horiana_20[genbank_20GCA_5F001624995.1_202016-04-20] 87 sequences; 66,403,143 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq23 132 1e-25 >seq23 Length=1203155 Score = 132 bits (146), Expect = 1e-25 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| ||||| ||||||||||| || ||| ||| ||||| |||| || ||| | Sbjct 977771 ACAGGGAAAACAATCACTTTGGAGGTCGAATCTTCCGACACGATCGACAACGTCAAGGCA 977712 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| || || ||| ||| |||| ||||| ||||||||| Sbjct 977711 AAGATCCATGACAAGGAAGGTATCCCCCCCGACCAGCAACGACTGATCTTTGCCGGAAAG 977652 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | |||||||| | || ||||| ||||||||| | |||||||| || ||||||||| Sbjct 977651 CAGCTTGAAGATGGTCGCACCTTGGCGGATTACAACATTCAGAAAGAATCCACTCTTCAC 977592 Query 206374 CTTGTT 206379 | ||| Sbjct 977591 TTGGTT 977586 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 206179 TTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| | ||||| || || || ||||| ||||||| || |||||||| | Sbjct 979243 TTTTTCAACAGTCTCACTGGGAAGACCATCACCCTGGAAGTCGAGTCATCTGACACCATT 979184 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 || || ||| ||||||||||| || ||||| ||| ||||| || || | Sbjct 979183 GACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATTCCCCCGGATCAACAGCGATTG 979124 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 ||||| || || ||||| |||||||| || | || |||||||| |||||| |||| || Sbjct 979123 ATCTTTGCTGGTAAGCAATTGGAAGACGGTCGTACCTTGGCCGACTACAACATCCAAAAG 979064 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || | |||||||| ||| ||||||| Sbjct 979063 GAATCCACCTTGCACCTTGTGTTGCGACTTCG 979032 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 |||||||| |||||||||||||||||||| || || ||||| | || || ||| Sbjct 978070 CTCACAGGTAAAACGATCACTTTGGAAGTTGAGTCCTCCGACACCATTGACAATGTGAAG 978011 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 ||||||||||| || || || || ||||| || | || || ||||| || Sbjct 978010 GCTAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAACAGCGTCTCATTTTCGCTGGC 977951 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 || || | |||||||| | || ||||| ||||||||| |||| || || ||||||||| Sbjct 977950 AAACAACTTGAAGATGGGCGTACCTTGGCTGATTACAACATCCAAAAGGAATCTACTCTT 977891 Query 206371 CACCTTGT 206378 || || || Sbjct 977890 CATCTCGT 977883 Score = 86.0 bits (94), Expect = 1e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || || || ||||||||||||||||| ||||| || ||||| | || || ||| Sbjct 978656 CTGACTGGCAAAACGATCACTTTGGAGGTGGAGTCCTCCGACACCATTGACAATGTCAAG 978597 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 || |||||||| || ||||| || |||||| || | || ||||| || || Sbjct 978596 GCGAAAATTCAAGACAAGGAAGGCATCCCTCCGGACCAGCAGCGTCTGATCTTTGCTGGT 978537 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 ||||| | ||||| || | || | || || |||||| | || || ||||| || ||| Sbjct 978536 AAGCAACTTGAAGACGGCCGCACCCTTGCGGACTACAACATTCAAAAGGAGTCCACCCTT 978477 Query 206371 CACCTTGTTTTGAGACTTCG 206390 ||| | ||| | ||||||| Sbjct 978476 CACTTGGTTCTCCGACTTCG 978457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819482639127